CDS
| Accession Number | TCMCG057C41381 |
| gbkey | CDS |
| Protein Id | XP_018443546.1 |
| Location | complement(join(15530853..15532886,15537057..15537079,15537424..15537472)) |
| Gene | LOC108815440 |
| GeneID | 108815440 |
| Organism | Raphanus sativus |
Protein
| Length | 701aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018588044.1 |
| Definition | PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA helicase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12820
[VIEW IN KEGG] |
| EC |
3.6.4.13
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGACTAGCGTTGTAGGAATGACAACGTACGTTGCTGTAAATATACCAAAACTTGGAGGGCTTAATGCTTTAATGAATAAATGGAATGGAAAGGCTTATACTCGGAGCTATTACGAGATTCTAGAGAAACGGAGGAGCCTACCTGTGTATGCGCAGAAACAAGAGTTTCTCCAATGTTTGATGAGCAACCAGACAGTGATACTTGTCGGTGAAACCGGTAGTGGTAAAACAACACAGATCCCACAGTTCGTTTTGGAAGCCGTGCACGTGGACGACGCAGGAAAAAACCCTAGAAAGTGGCTGGTCGGGTGCACACAGCCTCGTAGAGTTGCAGCCATGTCTGTGGCAAGTCGTGTCGCTGAAGAGATGGATGTAGCTATCGGTGAAGAAGTAGGTTACACGGTCCGTTTCGAGGATTGCACTAGCTCCAAAACAGTGCTCAAGTACTTAACCGACGGTATGCTTCTGAGAGAAGCAATGACGGATCCGCTTCTACAGAGATACAAAGTGTTGGTTCTCGACGAGGCCCACGAAAGAACGTTAGCTACGGATCTACTCTTTGGCATTCTGAAACGAGTCTTGAGAAACAGACCGGACCTTAAGCTGGTTGTGATGAGTGCTACTTTGGAAGCTGAAAAGTGTCTCGAGTATTTTAGCGGTGCACCTCTCATGAAAGTCCCCGGCAGGCTCCATCCCGTAGAGATCTTGTACACGCGAGAACCTGAGAGAGACTATCTCGACGCTGCTGTTAGGACCGTTGTTCAGATTCACATGTTTGAGCCGCCTGGTGACGTTCTTGTTTTCTTAACCGGTGAGGAAGAGATTGAAGAAGCATGCCGAAAAATCGTCGGTGAGCTTGGGGATCAAGTCAACGTCGTGCCGTTGTATTCTTCTCTTCCACCTGCTATGCAACAGAAGATCTTTGATCCCGCTACGGGGAATAGGAGAAAGATTGTTGTATCCACCAACATCGCAGAGACTTCTTTAACCATCGATGGGGTTGTCTACGTGGTTGATCCTGGTTTCGCTAAGCAGAAACTATACAACCCTAAAACCCGTGTTGAGTCGTTGTTGGTGTCTCCTATATCACAAGCAAGTGCTCGCCAACGAGCAGGTCGTGCAGGTAGAACACGGCCTGGAAAATGTTTCAGGCTTTACACAGAGAAGAGTTTCAACAACGATCTGATTGCGCAGACGCATCCTGAGATATTGAGATCGAACCTTGCAAACACTGTTCTGACCTTGAATAAACTTGGTGTGGATAACTTGGTTAGCTTCGAGTTTATGGATTCTCCTGCTCCTGTGACGCTGGGTGGGGCCTTGAGCGATTTGGTTGATCTTGGAGCATTAGATGCTGATGAAGGTAAGTTCGGTAACTTGACAAGGACAGGTGAGATGATGAGTGAGTTTCCTTTGGATCCGCAGATGGCAAAGATGCTCATAGTCAGTCCTAAATTCAACTGCTCCAACGAGATCCTCTCGATTTCGGCGATGCTATCAGTACCGAACTGCTTTATAAGGCCTAGAGGAGAGGCTCGGAAAGAAGCAGATGAGGCCAGAGCTAGGTTTGGACACGTTGATGGAGATCACCTGACGTTGCTGAATGTGTACAATGCTTATAAACAAAACAATGGAGACTCGAACTGGTGCTACGAGAACTTCATCAGCCATAGAGCAATGAAGTCTGCGGAGAATGTTAGAGAGCAGTTGGTGAGGATAATGTCCAGGTTTAATCTCAAGATTTGCAGCTCTGATTATACTAGCCGCGACTACTATAATAACATAAGAAAGGCATTGCTTGCTGGCTATTTCATGCAAGTGGCTCATTTAGACCGCACTGGCTGCCGCTACTTGACCGCCAAAGATGACCAAATGGTTCACTTGCATCCATCGTGTTGCCTGGATTACAAACCGGAGTGGGTAGTCTATAATGAATATGTTTTGACTAGTCGGAATTTCATCCGGACTGTCACATATATTCGAGGTGAATGGCTAATGGATGTTGCACCACAGTGTTATCATCTTAACAACTTCAAAAACTGTGAGACCAAACGAGTCCTCCAGAAGCTTTCTAAGAAGAGAGACAGAGAGGGGAATCCAAAGTGA |
| Protein: MTSVVGMTTYVAVNIPKLGGLNALMNKWNGKAYTRSYYEILEKRRSLPVYAQKQEFLQCLMSNQTVILVGETGSGKTTQIPQFVLEAVHVDDAGKNPRKWLVGCTQPRRVAAMSVASRVAEEMDVAIGEEVGYTVRFEDCTSSKTVLKYLTDGMLLREAMTDPLLQRYKVLVLDEAHERTLATDLLFGILKRVLRNRPDLKLVVMSATLEAEKCLEYFSGAPLMKVPGRLHPVEILYTREPERDYLDAAVRTVVQIHMFEPPGDVLVFLTGEEEIEEACRKIVGELGDQVNVVPLYSSLPPAMQQKIFDPATGNRRKIVVSTNIAETSLTIDGVVYVVDPGFAKQKLYNPKTRVESLLVSPISQASARQRAGRAGRTRPGKCFRLYTEKSFNNDLIAQTHPEILRSNLANTVLTLNKLGVDNLVSFEFMDSPAPVTLGGALSDLVDLGALDADEGKFGNLTRTGEMMSEFPLDPQMAKMLIVSPKFNCSNEILSISAMLSVPNCFIRPRGEARKEADEARARFGHVDGDHLTLLNVYNAYKQNNGDSNWCYENFISHRAMKSAENVREQLVRIMSRFNLKICSSDYTSRDYYNNIRKALLAGYFMQVAHLDRTGCRYLTAKDDQMVHLHPSCCLDYKPEWVVYNEYVLTSRNFIRTVTYIRGEWLMDVAPQCYHLNNFKNCETKRVLQKLSKKRDREGNPK |